Glycolate oxidase iron-sulfur subunit (PA5353)

Identification
Name: Glycolate oxidase iron-sulfur subunit
Synonyms: Not Available
Gene Name: glcF
Enzyme Class: Not Available
Biological Properties
General Function: Involved in iron-sulfur cluster binding
Specific Function: Specific function unknown
Cellular Location: Not Available
KEGG Pathways:
  • Glyoxylate and dicarboxylate metabolism pae00630
KEGG Reactions:
Thumb+Thumb ↔ Thumb+Thumb
Glycolic acid + Oxygen ↔ Glyoxylic acid + Hydrogen peroxide
ReactionCard
SMPDB Reactions:
Thumb+an oxidized electron-transfer flavoprotein? → Reduced acceptor+Thumb
Glycolic acid + an oxidized electron-transfer flavoprotein? → Reduced acceptor + Glyoxylic acid
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2 Thumb+2 an oxidized electron-transfer flavoprotein? → 2 Reduced acceptor+2 Thumb
2 Glycolic acid + 2 an oxidized electron-transfer flavoprotein? → 2 Reduced acceptor + 2 Glyoxylic acid
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PseudoCyc/BioCyc Reactions:
Thumb+Thumb ↔ Thumb+Thumb
Glycolic acid + Oxygen ↔ Glyoxylic acid + Hydrogen peroxide
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Thumb+an oxidized electron-transfer flavoprotein? → Reduced acceptor+Thumb
Glycolic acid + an oxidized electron-transfer flavoprotein? → Reduced acceptor + Glyoxylic acid
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2 Thumb+2 an oxidized electron-transfer flavoprotein? → 2 Reduced acceptor+2 Thumb
2 Glycolic acid + 2 an oxidized electron-transfer flavoprotein? → 2 Reduced acceptor + 2 Glyoxylic acid
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Thumb
an (S)-2-hydroxyacid + oxygen → hydrogen peroxide + a 2-oxo carboxylate
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PAMDB110053+PAMDB000624 → PAMDB110768+PAMDB001640
glycolate + Oxygen → glyoxylate + Hydrogen peroxide
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Acceptor+PAMDB110053 → Donor-H2+PAMDB110768
Acceptor + glycolate → Donor-H2 + glyoxylate
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Complex Reactions:
Thumb+Thumb → Thumb+Thumb
Glycolic acid + Ubiquinone-8 → Glyoxylic acid + Ubiquinol-8
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Thumb+Menaquinone 8 → Thumb+Thumb
Glycolic acid + Menaquinone 8 → Glyoxylic acid + Menaquinol 8
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Thumb+Thumb → Thumb+Thumb
2-Demethylmenaquinone 8 + Glycolic acid → 2-Demethylmenaquinol 8 + Glyoxylic acid
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Transports: Not Available
Metabolites:
PAMDB IDNameView
PAMDB0015632-Demethylmenaquinol 8MetaboCard
PAMDB0015642-Demethylmenaquinone 8MetaboCard
PAMDB004153GlycolateMetaboCard
PAMDB000475Glycolic acidMetaboCard
PAMDB000043Glyoxylic acidMetaboCard
PAMDB001640Hydrogen peroxideMetaboCard
PAMDB001653Menaquinol 8MetaboCard
PAMDB000624OxygenMetaboCard
PAMDB000237Ubiquinol-8MetaboCard
PAMDB001700Ubiquinone-8MetaboCard
GO Classification:
Function
binding
catalytic activity
electron carrier activity
iron-sulfur cluster binding
metal cluster binding
oxidoreductase activity
Process
metabolic process
oxidation reduction
Gene Properties
Locus tag: PA5353
Strand: -
Entrez Gene ID: 877710
Accession: NP_254040.1
GI: 15600546
Sequence start: 6019888
Sequence End: 6021114
Sequence Length: 1226
Gene Sequence: 
>PA5353
ATGCAAACCAACCTCTGCGATTCCGCCCGGCAACGCGCCGAGGCCGCCGAAGCCGAGCGCATCCTGCGCAGCTGCGTGCACTGCGGTTTCTGCAACGCCACCTGCCCGACCTACCAGGAGCTGGGCGACGAACTCGACGGCCCGCGCGGACGGATCTACCTGATCAAGCAGTTTCTCGAGCGCGACGAGGCCAGCGAGCGCACTCGCCTGCACCTCGATCGCTGCCTGAGCTGCCGCAACTGCGAAACCACCTGCCCGTCCGGAGTCGAGTACCACAAGCTGCTGGATATCGGCCGCGACCTCCTCGCCGAACGCCTGCCGCGCGGCTTCCGGCAACGCCTGCTGCGCGACGGGCTGCGCCTGCTGGCCCCGCGCCCGGGGTTGTTCGGCGCGCTGGCCGGCGCTGCCGGGCGGCTGAGGCCTCTGCTGCCTGAGGCGATGCAGGGCAAGCTGCCACGTCGGGTCGCGGCGCCGGGCAGGCGGCCGCAGCCCCGGCATGCGCGGCGCGTGCTGCTGCTCGAAGGTTGCGTGCAGCCGGCGCTGTCGCCGAACACCAACGCCGCCGCCGCGCGGGTTCTGGACCGTCTGGGAATCAGCGTGACGCCGGCGGCTGCGGCCGGCTGCTGCGGCGCGCTGGATTTCCACCTGGATGCGCAGGAGCGCGGCCGCCAGCGCGCGCGGCGCAATATCGACGCCTGGTGGCCGTTGCTGCGCGAGGGTGCCGAGGCCATCGTGCAGACCGCCAGCGGCTGCGGCGCCTTCGTCAAGGACTACGCCTACCTGCTGCGCGACGACCCACGGTACGCGGACAAGGCGCGCGAGGTCGCCGCCGCTGCCCGCGACCTGGTGGAAGTGCTTCGCGACGAGCCGCTGGAGTCCCTCGGCCTGCGCTGCGACCAGCGCCTGGCATTCCACTGCCCATGCACACTGCAGCACGCGCAACGACTGGGCGGGGCCGTGGAGGCGGTGCTGCGGCGACTGGGCTTCCATCTCACCGAGGTGGCCGACGGTCATCTCTGCTGCGGCTCCGCCGGCACCTACTCGCTGACCCAGCCGGCGCTGTCCCAGCGTCTGCGCGACAACCGCCTGGACGCCCTGGAAAGCGGCGCGCCGGATGTCATCGTCACGGCCAACGTCGGTTGCCAGGCCCATCTCGACGGGGCCGGACGGACCCCGGTACGCCACTGGATCGAGCTGCTCGACCAGGCCTTGCCCGGAGGAGAGTGA
Protein Properties
Protein Residues: 408
Protein Molecular Weight: 44.7 kDa
Protein Theoretical pI: 8.15
Hydropathicity (GRAVY score): -0.299
Charge at pH 7 (predicted): 8.08
Protein Sequence: 
>PA5353
MQTNLCDSARQRAEAAEAERILRSCVHCGFCNATCPTYQELGDELDGPRGRIYLIKQFLERDEASERTRLHLDRCLSCRNCETTCPSGVEYHKLLDIGRDLLAERLPRGFRQRLLRDGLRLLAPRPGLFGALAGAAGRLRPLLPEAMQGKLPRRVAAPGRRPQPRHARRVLLLEGCVQPALSPNTNAAAARVLDRLGISVTPAAAAGCCGALDFHLDAQERGRQRARRNIDAWWPLLREGAEAIVQTASGCGAFVKDYAYLLRDDPRYADKAREVAAAARDLVEVLRDEPLESLGLRCDQRLAFHCPCTLQHAQRLGGAVEAVLRRLGFHLTEVADGHLCCGSAGTYSLTQPALSQRLRDNRLDALESGAPDVIVTANVGCQAHLDGAGRTPVRHWIELLDQALPGGE
References
External Links:
Resource Link
Genome ID: PA5353
Entrez Gene ID: 877710
NCBI Protein ID: 15600546
General Reference: PaperBLAST - Find papers about PA5353 and its homologs