P. aeruginosa Metabolome Database Protein PA4269

Identification

Name:

DNA-directed RNA polymerase beta* chain

Synonyms:

Not Available

Gene Name:

rpoC

Enzyme Class:

Not Available

Biological Properties

General Function:

transcription, DNA-templated

Specific Function:

DNA binding, DNA-directed RNA polymerase activity

Cellular Location:

Outer Membrane Vesicle

KEGG Pathways:

Purine metabolism pae00230
Pyrimidine metabolism PW000942

KEGG Reactions:

Not Available

SMPDB Reactions:

Not Available

PseudoCyc/BioCyc Reactions:

RNA

↔

RNA

Adenosine triphosphate + RNA + RNA ↔ Pyrophosphate + RNA
ReactionCard

RNA

↔

RNA

Guanosine triphosphate + RNA ↔ Pyrophosphate + RNA
ReactionCard

RNA

↔

RNA

Cytidine triphosphate + RNA ↔ Pyrophosphate + RNA
ReactionCard

RNA

↔

RNA

Uridine triphosphate + RNA ↔ Pyrophosphate + RNA
ReactionCard

Nucleoside triphosphate

RNA(n)

→

RNA(n+1)

Nucleoside triphosphate + RNA(n) → Pyrophosphate + RNA(n+1)
ReactionCard

Nucleoside triphosphate

RNA

↔

Nucleoside triphosphate + RNA ↔ Pyrophosphate
ReactionCard

Complex Reactions:

Not Available

Transports:

Not Available

Metabolites:

Not Available

GO Classification:

Function
DNA binding
DNA-directed RNA polymerase activity
Process
transcription, DNA-templated

Gene Properties

Locus tag:

PA4269

Strand:

Entrez Gene ID:

881710

Accession:

NP_252959.1

GI:

15599465

Sequence start:

4772279

Sequence End:

4776478

Sequence Length:

4199

Gene Sequence:

>PA4269
TTGAAAGACTTGCTTAATCTGTTGAAAAACCAGGGTCAAATCGAAGAGTTCGATGCCATCCGTATTGGCCTGGCTTCGCCCGAGATGATTCGTTCCTGGTCTTTCGGCGAAGTTAAAAAGCCGGAAACCATCAACTACCGTACCTTCAAGCCGGAGCGCGACGGCCTGTTCTGCGCCAAGATCTTCGGCCCGGTGAAGGATTACGAGTGCCTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGTGTGATCTGCGAGAAGTGCGGCGTGGAAGTCGCCCTGGCCAAGGTGCGCCGCGAGCGCATGGGCCACATCGAGCTGGCTTCGCCGGTTGCCCACATCTGGTTCCTGAAGTCGCTGCCGTCCCGTATCGGCCTGCTGCTGGACATGACCCTGCGCGATATCGAGCGCGTGCTCTATTTCGAGAGCTACGTGGTGATCGATCCGGGCATGACCACCCTGGAAAAGGGCCAGCTGCTGAACGACGAGCAATACTTCGAGGCCCTCGAAGAGTTCGGTGACGATTTCGATGCTCGCATGGGCGCCGAAGCTGTTCACGAACTGCTCAACGCCATCGACCTGGAGCACGAGATCGGCCGCCTGCGCGAAGAGATTCCGCAGACCAACTCGGAAACCAAGATCAAGAAGCTGTCCAAGCGCCTGAAGCTGATGGAAGCCTTCCAGGGCTCCGGCAACAAGCCTGAGTGGATGGTCCTGACCGTCCTGCCGGTGCTGCCGCCGGACCTGCGTCCGCTGGTTCCGCTGGATGGCGGTCGCTTCGCGACTTCCGACCTGAACGACCTGTATCGTCGGGTGATCAACCGTAACAACCGTCTGAAGCGCCTGCTCGACCTGGCTGCTCCGGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCCGTCGACGCCCTGCTCGACAACGGCCGTCGCGGTCGCGCCATCACCGGCTCGAACAAGCGTCCGCTGAAGTCGCTGGCCGACATGATCAAGGGCAAGCAAGGTCGCTTCCGTCAGAACCTGCTCGGCAAGCGCGTGGACTACTCCGGTCGTTCCGTGATCACCGTGGGCCCGACCCTGCGCCTGCACCAGTGCGGTCTGCCGAAGAAGATGGCCCTGGAGCTGTTCAAGCCGTTCATTTTCGGCAAGCTGGAAGGTCGTGGTATGGCCACCACCATCAAGGCCGCCAAGAAAATGGTCGAGCGCGAGCTGCCCGAGGTCTGGGACGTTCTCGCCGAAGTCATCCGCGAGCATCCGGTTCTCCTGAACCGTGCGCCGACCCTGCACCGTCTGGGCATCCAGGCGTTCGAGCCGGTCCTCATCGAAGGCAAGGCGATCCAGCTGCACCCGCTGGTCTGCGCCGCGTACAACGCCGACTTCGACGGTGACCAGATGGCCGTCCACGTTCCGCTGACCCTCGAGGCCCAGCTGGAAGCGCGCGCGCTGATGATGTCCACCAACAACATCCTGTCGCCCGCCAACGGCGAGCCGATCATCGTTCCGTCGCAGGACGTGGTAATGGGTCTGTACTACATGACCCGTGAAGCGATCAACGCGAAGGGCGAGGGCATGGCCTTCGCCGACCTGCAGGAAGTCGACCGCGCCTACCGCAGCGGCCAGGCGTCCCTGCACGCTCGCGTAAAAGTGCGCATCAACGAAAAGATCAAGGGTGAAGACGGCCAACTGACCGCCAATACCCGTATCGTCGACACCACCGTCGGCCGCGCGCTGCTGTTCCAGGTCGTTCCGGCCGGCCTGCCGTTCGACGTGGTCAACCAGTCGATGAAGAAGAAGGCGATCTCCAAGCTGATCAACCACTGCTATCGCGTGGTGGGTCTGAAGGACACCGTCATCTTCGCCGACCAGCTGATGTACACCGGTTTCGCCTACTCGACCATTTCCGGCGTGTCCATCGGCGTCAACGACTTCGTCATCCCGGACGAGAAGGCGCGGATCATCAACGCCGCCACCGACGAAGTGAAGGAGATCGAGAGCCAGTACGCCTCCGGCCTGGTAACCCAGGGCGAGAAGTACAACAAGGTGATCGACCTGTGGTCGAAGGCCAACGACGAAGTGTCCAAGGCGATGATGGCCAACCTCTCGAAAGAGAAGGTCGTCGATCGCGAGGGCAAGGAAGTCGACCAGGAGTCCTTCAACTCCATGTACATGATGGCTGACTCGGGTGCGCGGGGCTCCGCGGCCCAGATCCGTCAGCTGGCAGGTATGCGTGGCCTGATGGCCAAGCCGGACGGCTCGATCATCGAGACCCCGATCACCGCGAACTTCCGTGAAGGCCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAGGGTCTGGCGGATACCGCGCTGAAGACCGCGAACTCCGGTTACCTGACCCGTCGTCTGGTCGACGTGGCCCAGGATCTGGTAGTGACCGAGATCGATTGCGGTACCGAGCACGGCCTGCTGATGTCGCCGCACATCGAAGGCGGCGACGTGGTCGAACCGCTCGGCGAGCGCGTGCTCGGCCGTGTGATCGCGCGCGACGTGTTCAAGCCGGGCAGCGACGAGGTCATCGTGCCGGCCGGCACCCTGATCGACGAGAAGTGGGTGGACTTCCTCGAAGTGATGAGCGTCGACGAAGTGGTGGTGCGTTCCCCGATCACCTGCGAAACCCGTCATGGCATCTGCGCCATGTGCTACGGCCGCGACCTGGCCCGTGGCCATCGCGTCAACATCGGCGAGGCGGTCGGTGTCATCGCTGCCCAGTCCATCGGTGAGCCGGGCACCCAGCTGACCATGCGTACCTTCCACATCGGTGGTGCGGCCAGCCGGACCTCCGCGGCCGACAACGTCCAGGTGAAGAACGGCGGCACCATCCGCCTGCACAACCTGAAGCATGTGGTTCGTGCCGACGGCGCGCTGGTCGCGGTTTCCCGTTCCGGCGAACTGGCGGTTGCCGACGACTTCGGTCGCGAGCGCGAGCGCTACAAGCTGCCGTACGGTGCGGTGATCTCGGTCAAGGAAGGTGACAAGGTCGACCCGGGCGCTATCGTCGCCAAGTGGGACCCGCACACCCACCCGATCGTCACCGAGGTGGACGGTACCGTGGCCTTCGTGGGCATGGAAGAGGGCATCACCGTCAAGCGTCAGACCGACGAACTGACCGGCCTGACCAACATCGAAGTGATGGATCCGAAGGACCGTCCGGCTGCCGGCAAGGACATCCGTCCGGCCGTGAAGCTGATTGATGCCGCGGGCAAGGACCTGCTGCTGCCGGGTACCGACGTACCGGCGCAGTACTTCCTGCCGGCCAACGCCCTGGTCAACCTGACCGACGGCGCCAAGGTGAGCATCGGTGACGTTGTCGCGCGTATCCCGCAGGAAACCTCGAAGACCCGTGACATCACCGGTGGTCTGCCGCGCGTTGCCGACCTGTTCGAGGCTCGTCGTCCGAAAGAGCCTTCGATCCTGGCGGAAATCAGCGGCACCATCTCCTTCGGCAAGGAGACCAAGGGCAAGCGCCGCCTGGTCATCACGCCGAACGATGGCAGCGATCCGTACGAGGAGCTGATTCCGAAGTGGCGTCACCTGAACGTGTTCGAAGGCGAACAGGTGAACCGCGGCGAAGTCATCTCCGACGGTCCGAGCAACCCGCACGACATCCTGCGCCTCCTGGGCGTGAGCTCGCTGGCGAAGTACATCGTCAACGAGATTCAGGACGTCTACCGTCTGCAGGGCGTGAAGATCAACGACAAGCACATCGAGACCATCCTGCGTCAGATGCTGCGCAAGGTCGAAGTCAGCGAGTCCGGCGACTCCAGCTTCATCAAAGGCGACCAGGTGGAACTCACCCAGGTGCTGGAAGAGAACGAACAGCTCGGTACCGAGGACAAGTTCCCGGCCAAGTACGAGCGGGTTCTGCTGGGTATCACCAAGGCCTCCCTGTCGACCGAGTCGTTCATTTCCGCGGCGTCGTTCCAGGAGACCACCCGCGTCCTCACCGAGGCGGCGGTCACCGGCAAGCGCGACTTCCTGCGTGGTCTGAAAGAGAACGTGGTCGTGGGTCGCCTGATCCCGGCCGGTACCGGTCTGGCTTACCACAGCGAACGCAAGCGTCAGCGCGACCTCGGCAAGCCGCAGCGTGTGAGTGCCAGCGAGGCGGAAGCCGCACTGACCGAAGCGCTGAACTCGAGCGGTAACTAA

Protein Properties

Protein Residues:

1399

Protein Molecular Weight:

154.4 kDa

Protein Theoretical pI:

7.09

Hydropathicity (GRAVY score):

-0.23

Charge at pH 7 (predicted):

1.02

Protein Sequence:

>PA4269
MKDLLNLLKNQGQIEEFDAIRIGLASPEMIRSWSFGEVKKPETINYRTFKPERDGLFCAKIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVALAKVRRERMGHIELASPVAHIWFLKSLPSRIGLLLDMTLRDIERVLYFESYVVIDPGMTTLEKGQLLNDEQYFEALEEFGDDFDARMGAEAVHELLNAIDLEHEIGRLREEIPQTNSETKIKKLSKRLKLMEAFQGSGNKPEWMVLTVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQEAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPTLRLHQCGLPKKMALELFKPFIFGKLEGRGMATTIKAAKKMVERELPEVWDVLAEVIREHPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEARALMMSTNNILSPANGEPIIVPSQDVVMGLYYMTREAINAKGEGMAFADLQEVDRAYRSGQASLHARVKVRINEKIKGEDGQLTANTRIVDTTVGRALLFQVVPAGLPFDVVNQSMKKKAISKLINHCYRVVGLKDTVIFADQLMYTGFAYSTISGVSIGVNDFVIPDEKARIINAATDEVKEIESQYASGLVTQGEKYNKVIDLWSKANDEVSKAMMANLSKEKVVDREGKEVDQESFNSMYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTRRLVDVAQDLVVTEIDCGTEHGLLMSPHIEGGDVVEPLGERVLGRVIARDVFKPGSDEVIVPAGTLIDEKWVDFLEVMSVDEVVVRSPITCETRHGICAMCYGRDLARGHRVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRTSAADNVQVKNGGTIRLHNLKHVVRADGALVAVSRSGELAVADDFGRERERYKLPYGAVISVKEGDKVDPGAIVAKWDPHTHPIVTEVDGTVAFVGMEEGITVKRQTDELTGLTNIEVMDPKDRPAAGKDIRPAVKLIDAAGKDLLLPGTDVPAQYFLPANALVNLTDGAKVSIGDVVARIPQETSKTRDITGGLPRVADLFEARRPKEPSILAEISGTISFGKETKGKRRLVITPNDGSDPYEELIPKWRHLNVFEGEQVNRGEVISDGPSNPHDILRLLGVSSLAKYIVNEIQDVYRLQGVKINDKHIETILRQMLRKVEVSESGDSSFIKGDQVELTQVLEENEQLGTEDKFPAKYERVLLGITKASLSTESFISAASFQETTRVLTEAAVTGKRDFLRGLKENVVVGRLIPAGTGLAYHSERKRQRDLGKPQRVSASEAEAALTEALNSSGN

References

External Links:

Resource	Link
Genome ID:	PA4269
Entrez Gene ID:	881710
NCBI Protein ID:	15599465

General Reference:

PaperBLAST - Find papers about PA4269 and its homologs

DNA-directed RNA polymerase beta* chain (PA4269)