| Identification |
| Name: |
Riboflavin biosynthesis protein ribD |
| Synonyms: |
- Diaminohydroxyphosphoribosylaminopyrimidine deaminase
- DRAP deaminase
- Riboflavin-specific deaminase
- 5-amino-6-(5-phosphoribosylamino)uracil reductase
- HTP reductase
|
| Gene Name: |
ribD |
| Enzyme Class: |
|
| Biological Properties |
| General Function: |
Involved in zinc ion binding |
| Specific Function: |
Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate |
| Cellular Location: |
Cytoplasmic |
| KEGG Pathways: |
|
| KEGG Reactions: |
|
| SMPDB Reactions: |
| | | | |
 | + |  | + | NADPH | + |  | → |  | + | 5-Amino-6-(5'-phosphoribitylamino)uracil | + |  |
| |
|
| PseudoCyc/BioCyc Reactions: |
|
| Complex Reactions: |
| | | | |
| + | | → | 5-amino-6-(5-phospho-D-ribosylamino)uracil | + | |
| |
|
| Transports: |
Not Available |
| Metabolites: |
|
| GO Classification: |
| Function |
|---|
| 5-amino-6-(5-phosphoribosylamino)uracil reductase activity | | binding | | catalytic activity | | cation binding | | diaminohydroxyphosphoribosylaminopyrimidine deaminase activity | | hydrolase activity | | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines | | ion binding | | metal ion binding | | NADP or NADPH binding | | nucleotide binding | | oxidoreductase activity | | oxidoreductase activity, acting on CH-OH group of donors | | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | | transition metal ion binding | | zinc ion binding | | Process |
|---|
| metabolic process | | nitrogen compound metabolic process | | oxidation reduction | | riboflavin biosynthetic process | | riboflavin metabolic process |
|
| Gene Properties |
| Locus tag: |
PA4056 |
| Strand: |
- |
| Entrez Gene ID: |
879079 |
| Accession: |
NP_252745.1 |
| GI: |
15599251 |
| Sequence start: |
4536921 |
| Sequence End: |
4538042 |
| Sequence Length: |
1121 |
| Gene Sequence: |
>PA4056
ATGAACGCCGCCGACCCGCTGTACATGGCCCGCGCCCTGGAACTGGCGCGCCAGGGGCTGTACTCCACCCAGCCGAATCCGCGCGTCGGCTGCGTGCTGGTCAAGGACGGCCAGGTGGTCGGCGAGGGCTGGCACGTCCGCGCCGGCGAGCCGCACGCCGAGGTCCATGCCCTGCGCCAGGCCGGCGAGAATGCACGCGGCGCCACCGCCTACGTGACCCTCGAGCCCTGCAGCCACTTCGGCCGCACCCCGCCGTGCGCCGATGCGCTGGTGGGCGCCGGGGTGGCGCGGGTGGTCGCGGCGATGCAGGATCCCAACCCCGAGGTCGCCGGTCGCGGCCTGCTGCGTCTGATGCAGGCCGGCATCGCGGTGCAGAGCGGCGTCCTCGAAGCCGAGGCGCGGGAACTCAACATCGGTTTCATCAAGCGCATGGAACATGGCCTGCCGTTCGTCCGGGTCAAGCTGGCGATGAGCCTGGACGGGCGCACCGCCATGGCCAGCGGGGAAAGCCAGTGGATCACCGGGCCCTCCGCGCGTTCGGCGGTGCAGCGCTTGCGCGCTCGCTCCAGCGTGGTGTTGTCCGGCGCCGATACGCTGCTGGCGGACGATGCGCGGCTCAACGTACGCCCCGACGAACTGGGCCTGAACGCCGAGCTTACCGCGCTCGCCGCGGCTCGCCAGCCGTTGCGGGTGCTGGTCGACGGGCGCCTGCGGGTGCCGCTGGAGTCGGCGTTCTACCAGGCCGGTCCGGCGCTGGTGGCGACCTGCGCCGCCGCCTCGGCGCGCGAACGCTTCCAGGACGCCGGCCACGAACTGCTGGCGCTGCCCTCCGCCGAGGGCCACGTCGATTTGCACAAGCTGCTCCTGGAACTGGCGGCGCGCGGCGCCAACGAAGTGCTGGTGGAGGCCGGCCCGCGTCTGGCCGGCGCCTTCGCCCGGCTGGGGCTGGTGGATGAGTACCGGCTGTTCGTCGCGCCGAAGTTCCTCGGCTCCAGCGCCCGTCCTTTGCTCGATTGGCCGCTGGCGCGGATGGCCGATGCGGCGCAGTTGCGGATCGACGACATCCGCGCGGTGGGCGACGACTGGCTGGTCACCGCGCGGCCCCATCTGCGGGACGCCTGA |
| Protein Properties |
| Protein Residues: |
373 |
| Protein Molecular Weight: |
39.8 kDa |
| Protein Theoretical pI: |
7.29 |
| Hydropathicity (GRAVY score): |
0.019 |
| Charge at pH 7 (predicted): |
1.05 |
| Protein Sequence: |
>PA4056
MNAADPLYMARALELARQGLYSTQPNPRVGCVLVKDGQVVGEGWHVRAGEPHAEVHALRQAGENARGATAYVTLEPCSHFGRTPPCADALVGAGVARVVAAMQDPNPEVAGRGLLRLMQAGIAVQSGVLEAEARELNIGFIKRMEHGLPFVRVKLAMSLDGRTAMASGESQWITGPSARSAVQRLRARSSVVLSGADTLLADDARLNVRPDELGLNAELTALAAARQPLRVLVDGRLRVPLESAFYQAGPALVATCAAASARERFQDAGHELLALPSAEGHVDLHKLLLELAARGANEVLVEAGPRLAGAFARLGLVDEYRLFVAPKFLGSSARPLLDWPLARMADAAQLRIDDIRAVGDDWLVTARPHLRDA |
| References |
| External Links: |
|
| General Reference: |
PaperBLAST - Find papers about PA4056 and its homologs
|
