Identification
Name: Sphingosine-responsive Regulator, SphR
Synonyms: Not Available
Gene Name: sphR
Enzyme Class: Not Available
Biological Properties
General Function: positive regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, sphingosine catabolic process, sphingosine catabolic process
Specific Function: transcription regulatory region DNA binding, sphingolipid binding, DNA binding, sequence-specific DNA binding transcription factor activity, sequence-specific DNA binding
Cellular Location: Cytoplasmic
KEGG Pathways:
    KEGG Reactions: Not Available
    SMPDB Reactions: Not Available
    PseudoCyc/BioCyc Reactions:
    Complex Reactions: Not Available
    Transports: Not Available
    Metabolites: Not Available
    GO Classification:
    Function
    transcription regulatory region DNA binding
    sphingolipid binding
    DNA binding
    sequence-specific DNA binding transcription factor activity
    sequence-specific DNA binding
    Process
    positive regulation of transcription, DNA-templated
    regulation of transcription, DNA-templated
    sphingosine catabolic process
    sphingosine catabolic process
    Gene Properties
    Locus tag: PA5324
    Strand: -
    Entrez Gene ID: 879621
    Accession: NP_254011.1
    GI: 15600517
    Sequence start: 5994741
    Sequence End: 5995811
    Sequence Length: 1070
    Gene Sequence:
    >PA5324
    ATGCACAACAATGCCGCCGATGCGCGCTACGAACTCGCCCAGGTATCCACCTTCCTGCTGCAGACGCTGGCCGAGGTGGTCGAAGGCCATGGTGTCGATCCCGCGCGGCTGTGCCGGGGCCTGGGCTTCACCGTCGAAGACCTGCAGGACCCTACCCAGCGCATCTCCTACCGCCAGGCCGTGAGCATGATCCAGCGTGCCCTCCAGGCCCTGCCGGAGCGGGGACTGGGGCTGTGGGTCGGACACCAGAACGTGCTCGGCACCCTTGGCCTGCTGGGCCATGTGCTGTCGCTGTGCCGGACCCTGCGCGACGCGTTCGACATCGGCGTGCGCTACCAGCACAGCTCGGGCGGTATCGTCACCTCCAGCGTCTACCAGCAGGGCGACACCTTCTTCGTCGAGGTCGAATGCCACCTGCCCAGCAGCGAGGTGCAGGTGTTCGCCATCGAGGAGTTCTTCGCCAGCCTGCTGGTGTATGGGCGTGCCCTGGTCAGCCCGGCGTTCGAACCGCTGGGCATCGAACTCATCCATGCCGCTCCGCCCTACGCGGGCGAGTACCTGCGCCTGCTGGGCCCCCAGGTACGCTTCGGCTGCCTGCACAACCGCATGGCGATCGCCAGCCACTGGCTGGACATGCGCCTGCCCAACCACAACCTGCCGGCGTTGCGCCAGGCGCTGGCCCTGCTGGAGCAGGAAAGCACCCAGGTGCACCGGAAACTCGACCTGGTCCAGGCGGTGGAACGGGCCATCGCCCGCGACCTCAGCCTGGGCAGCCAGATCGAAAGGATTTCCGCCGAACTGAACATGAGCAGCCGCACCCTGCGGCGCCGGCTGGCCGAACACGGGCTGACCTTCGAGGCGTTGCTGGAACAGGTGCGACGAGGGCGGGCGATGAGCCTGCTGGGCAACCCCGGGATGTCCATCGAACGCATCACCGAGGAAGTGGGATACCGTGACATCCGCAGTTTCAGGCGCGCGTTCAAGCGCTGGACGGGAGTGAGCCCGGCGACCTTCCGTAGCGAGGGCACGAGCCCGTTGGACCAGGTCTTCACGCTGGCCGCGCGACGCTAA
    Protein Properties
    Protein Residues: 356
    Protein Molecular Weight: 39.8 kDa
    Protein Theoretical pI: 8.05
    Hydropathicity (GRAVY score): -0.085
    Charge at pH 7 (predicted): 3.77
    Protein Sequence:
    >PA5324
    MHNNAADARYELAQVSTFLLQTLAEVVEGHGVDPARLCRGLGFTVEDLQDPTQRISYRQAVSMIQRALQALPERGLGLWVGHQNVLGTLGLLGHVLSLCRTLRDAFDIGVRYQHSSGGIVTSSVYQQGDTFFVEVECHLPSSEVQVFAIEEFFASLLVYGRALVSPAFEPLGIELIHAAPPYAGEYLRLLGPQVRFGCLHNRMAIASHWLDMRLPNHNLPALRQALALLEQESTQVHRKLDLVQAVERAIARDLSLGSQIERISAELNMSSRTLRRRLAEHGLTFEALLEQVRRGRAMSLLGNPGMSIERITEEVGYRDIRSFRRAFKRWTGVSPATFRSEGTSPLDQVFTLAARR
    References
    External Links:
    Resource Link
    Genome ID: PA5324
    Entrez Gene ID: 879621
    NCBI Protein ID: 15600517
    General Reference: PaperBLAST - Find papers about PA5324 and its homologs