Identification |
Name: |
exoribonuclease RNase R virulence protein VacB |
Synonyms: |
vacB |
Gene Name: |
rnr |
Enzyme Class: |
Not Available |
Biological Properties |
General Function: |
mRNA catabolic process, RNA metabolic process |
Specific Function: |
3'-5'-exoribonuclease activity, ribonuclease R activity, 3'-5' RNA helicase activity, RNA binding, nuclease activity, nucleic acid binding, ribonuclease activity |
Cellular Location: |
Cytoplasmic |
KEGG Pathways: |
|
KEGG Reactions: |
Not Available |
SMPDB Reactions: |
Not Available |
PseudoCyc/BioCyc Reactions: |
|
| → | Nucleoside-Monophosphates | + | Diribonucleotide |
| |
|
Complex Reactions: |
Not Available |
Transports: |
Not Available |
Metabolites: |
Not Available |
GO Classification: |
Function |
---|
3'-5'-exoribonuclease activity | ribonuclease R activity | 3'-5' RNA helicase activity | RNA binding | nuclease activity | nucleic acid binding | ribonuclease activity | Process |
---|
mRNA catabolic process | RNA metabolic process |
|
Gene Properties |
Locus tag: |
PA4937 |
Strand: |
- |
Entrez Gene ID: |
879988 |
Accession: |
NP_253624.1 |
GI: |
15600130 |
Sequence start: |
5538696 |
Sequence End: |
5541410 |
Sequence Length: |
2714 |
Gene Sequence: |
>PA4937
ATGGCCGATTGGCAAAACCTCGATCCCGAGGCCGCTCGCGAAGCGGAAAAGTACGAAAACCCCATCCCCAGCCGGGAACTGATCCTGGCTCACCTATCCGAGCGGGGCGCTCCGGCGACTCGCTCCCAGTTGCTCGACGAGTTCGGGCTCGCCGGCGAGGAGCCGGAAGAGGCCTTGCGTCGTCGCCTGCGCGCCATGGAGCGCGACGGGCAGCTTATCTATACGCGTCGTGGCGCCTATGCGCCGGTGGACAAGCTGGACCTGATCCGCGGCCGCATCAGCGGGCACCGCGACGGCTTCGGCTTCCTGATCCCCGACGATGGCAGCGACGACCTGTTCCTCAGTCCCACCCAGATGCGCCTGGTGTTCGACGGCGACCGCGCCCTGGCCCGGGTGTCCGGCCATGACCGGCGCGGACGCCGCGAAGGCCAGCTGGTCGAGGTGATCGAGCGGGCCCACGAGATCGTGGTCGGCCGCTACTTCGAGGAAAGCGGCATCGGCGTGGTGGTCGCGGACAACCCGAAGATCCAGCAGGAAGTCCTGATCCCGCCGGGCAAGGCCGGCAAGGCCAGGCACAACCAGTTCGTCCAGGTGCGCATCGAGCAATGGCCGAGCATCCACCGCCAGGCCCAGGGCGAGATCGTCGAGGTGCTCGGTGACTACATGGCGCCGGGGATGGAGATCGAAGTCGCCCTGCGCAGCTACGATATCCCCCACGTCTGGCCGGCCGCGGTGGAGAAGGAAGCGGCCAAGCTCAAGCCGGAAGTGGCGGAGAAGGACAAGGAAAAGCGTGTCGACCTGCGCCAGGTGCCCTTCGTCACCATCGACGGCGAGGATGCCCGCGACTTCGACGACGCGGTGTACGCCGAGGCCAAGCGCGGCGGCGGCTGGCGCCTGTTCGTGGCGATCGCCGATGTCTCGCACTACGTGAAGGTCGGTTCGGCGCTGGACGAAGAGGCGGCCAGGCGCGGCAACTCGGTGTATTTCCCCGAGCGGGTGATCCCGATGCTGCCGGAGGTGCTGTCCAATGGTCTCTGCTCGCTGAATCCGCTGGTCGACCGGCTGGCCATGGTCTGCGAGATGACCCTGTCCAAGGCTGGCAAGCTGACCGGCTACCAGTTCTACGAAGCGGTGATCCACTCCCATGCCCGCCTGACCTACACCAAGGTCAGCCAGTTGCTCGAGCATCCCGACAGCGTCGAGGCCGAGAACCTGCGCCAGCAGTTGCCCGGCGTGGTGCCGCACCTGCAGCAGCTGTATGCGTTGTATAAAGCGCTGCTGGCCGGCCGCCATGTCCGCGGCGCGATCGATTTCGAGACCCAGGAAACCCGCATCGTCTTCGGCGCCGACCGGAAGATCTCGGAAATCCGCCCGACCCAGCGCAACGATGCGCACCGCCTGATCGAAGAGTGCATGCTCTGCGCCAACGTGGCGACCGCACGCTTCCTGCAGAAGCACGCCATCCCGGCGTTGTACCGGGTGCATGACGGCCCGCCGCAGGAGAAACTCAACAACCTGCGCCAGTTCCTCGGCGAGCTGGGGTTGAGCCTCGGCCGCGGCAAGGCCGCGCCGACCCCGGGCGACTACCAGGAGTTGCTGGAGAAGATCCACGACCGCGCCGACTTCCGCCTGATCCAGACGGTCATGCTGCGTTCGCTCAGCCAGGCGGTGTACAGCCCGGACAACAATGGCCACTTCGGCCTCAACTACGACGCCTACACCCACTTCACCTCGCCGATCCGGCGCTACCCGGACCTGCTGGTGCATCGTGCGATCCGCAGTGTGATCCGCTCCAAGGCGGAGACTCCGCACGTGCAGCGGGCCGGCGCGGCGAGCATGCCCAAGGCGCGTATCTATCCGTACGACGAATTGCGCCTGGACCAGTTGGGCGAGCAGTGCTCGATGACCGAGCGGCGTGCCGACGAGGCCACCCGCGACGTGACCAACTGGCTGAAGTGCGAATACATGCGCGAGCGGGTCGGCGAGACCTTCCCTGGCGTAATCACTGCGGTCACCGGTTTCGGTCTGTTCGTCGAGCTGACCGACATCTTCGTCGAAGGCCTGGTCCATGTGACCGCGCTGCCCGGCGACTACTATCATTTCGACGCCGTGCACCATCGCCTCAGCGGCGAACGCACCGGGCGCAGCTTCCGTCTCGGCGACACCACGGAAGTGGTAGTGGCGCGGGTCGACCTGGACGAGCGGAAGATCGATTTCGAGCTGGCCGGAAACGTGCTGAGCGCGCCGATCGGACGCAAGAAGCGCAACGGCGACAAGTCGGCGAACGCCGGCAAGGCGCCGAAGGGGCGCAAGGGCGCATCCGTGCCCGAGGTCGACCTGGAGCCGGCGCTGGCCAGTCCCGACGCCGCGGTGGTGCCGCGGCGCAAGGCCGGCAAGGTGCAGGCGCTGCCGCCGGTCGCGCCGGAGCTGCTGGCGCAGGCCGCGGAGATGCTCGGCAACACCGACGTGCGCAAGAGTCGCGAGGTGAAGCAGGCGCTGCTCGCCGAGGCGCGTGTCGGCGGCAAGGACAAGGGCGGGAAGAAGGGCAAGGTCGTTCCTGCGGGCAAGAGCGCGAAGGGCAAGGCCAAGGACGGCAAGCCCGCCGCTGCCGCCAAGCCGGGCAAGCCGACCAAGCATCGCAAGGGGCCTTCCAAGCCGAAGGCCGACAACGCTCCGGCCGCCACCGGGGCGCGCAAACGTAAGGCCAAGTCATGA |
Protein Properties |
Protein Residues: |
904 |
Protein Molecular Weight: |
100.1 kDa |
Protein Theoretical pI: |
9.37 |
Hydropathicity (GRAVY score): |
-0.478 |
Charge at pH 7 (predicted): |
18.14 |
Protein Sequence: |
>PA4937
MADWQNLDPEAAREAEKYENPIPSRELILAHLSERGAPATRSQLLDEFGLAGEEPEEALRRRLRAMERDGQLIYTRRGAYAPVDKLDLIRGRISGHRDGFGFLIPDDGSDDLFLSPTQMRLVFDGDRALARVSGHDRRGRREGQLVEVIERAHEIVVGRYFEESGIGVVVADNPKIQQEVLIPPGKAGKARHNQFVQVRIEQWPSIHRQAQGEIVEVLGDYMAPGMEIEVALRSYDIPHVWPAAVEKEAAKLKPEVAEKDKEKRVDLRQVPFVTIDGEDARDFDDAVYAEAKRGGGWRLFVAIADVSHYVKVGSALDEEAARRGNSVYFPERVIPMLPEVLSNGLCSLNPLVDRLAMVCEMTLSKAGKLTGYQFYEAVIHSHARLTYTKVSQLLEHPDSVEAENLRQQLPGVVPHLQQLYALYKALLAGRHVRGAIDFETQETRIVFGADRKISEIRPTQRNDAHRLIEECMLCANVATARFLQKHAIPALYRVHDGPPQEKLNNLRQFLGELGLSLGRGKAAPTPGDYQELLEKIHDRADFRLIQTVMLRSLSQAVYSPDNNGHFGLNYDAYTHFTSPIRRYPDLLVHRAIRSVIRSKAETPHVQRAGAASMPKARIYPYDELRLDQLGEQCSMTERRADEATRDVTNWLKCEYMRERVGETFPGVITAVTGFGLFVELTDIFVEGLVHVTALPGDYYHFDAVHHRLSGERTGRSFRLGDTTEVVVARVDLDERKIDFELAGNVLSAPIGRKKRNGDKSANAGKAPKGRKGASVPEVDLEPALASPDAAVVPRRKAGKVQALPPVAPELLAQAAEMLGNTDVRKSREVKQALLAEARVGGKDKGGKKGKVVPAGKSAKGKAKDGKPAAAAKPGKPTKHRKGPSKPKADNAPAATGARKRKAKS |
References |
External Links: |
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General Reference: |
PaperBLAST - Find papers about PA4937 and its homologs
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