ribonuclease E (PA2976)

Identification
Name: ribonuclease E
Synonyms: ams
Gene Name: rne
Enzyme Class: Not Available
Biological Properties
General Function: RNA metabolic process, RNA processing
Specific Function: RNA binding, ribonuclease activity, ribonuclease E activity
Cellular Location: Cytoplasmic
KEGG Pathways:
KEGG Reactions: Not Available
SMPDB Reactions: Not Available
PseudoCyc/BioCyc Reactions:
RNase G degradation substrate mRNA + H2O → 2 a single-stranded RNA
ReactionCard
a polycistronic tRNA precursor + H2O → a tRNA precursor with a 5' extension and a long 3' trailer + a partially processed polycistronic tRNA precursor
ReactionCard
9S rRNA + 2 H2O → 5S rRNA + 2 a single-stranded RNA
ReactionCard
RNase E degradation substrate mRNA + n H2O → n a single-stranded RNA
ReactionCard
RNase E mRNA processing substrate + n H2O → RNase E processing product mRNA + n a single-stranded RNA
ReactionCard
a polycistronic tRNA precursor + H2O → a tRNA precursor with a 5' extension and a short 3' extension + a partially processed polycistronic tRNA precursor
ReactionCard
Complex Reactions: Not Available
Transports: Not Available
Metabolites: Not Available
GO Classification:
Function
RNA binding
ribonuclease activity
ribonuclease E activity
Process
RNA metabolic process
RNA processing
Gene Properties
Locus tag: PA2976
Strand: +
Entrez Gene ID: 880516
Accession: NP_251666.1
GI: 15598172
Sequence start: 3332881
Sequence End: 3336054
Sequence Length: 3173
Gene Sequence: 
>PA2976
ATGAAAAGAATGCTGATCAACGCGACTCAACCCGAGGAGTTGCGTGTTGCACTGGTCGACGGCCAACGCCTGTTCGACCTCGACATCGAGTCGGGCGCCCGCGAGCAGAAGAAGGCCAACATCTACAAAGGCCGCATCACTCGCGTCGAACCCAGCCTCGAAGCCGCCTTCGTCGACTTCGGCGCCGAACGCCACGGCTTCCTCCCCCTCAAAGAAATCTCCCGCGAATACTTCAAGAAATCCCCCGAAGGCCGGATCAACATCAAGGAAGTCCTGAGCGAAGGCCAGGAAGTCATCGTCCAGGTCGAGAAGGAAGAGCGCGGCAACAAGGGCGCCGCCCTGACCACCTTCATCAGCCTGGCCGGCCGTTACCTGGTGCTGATGCCGAACAACCCGCGCGCCGGCGGCATCTCCCGCCGTATCGAAGGCGAAGAGCGCAACGAGCTGCGCGAGGCCCTGAACGGCCTCAACGCACCGGCCGACATGGGCCTGATCGTGCGCACCGCCGGCCTCGGCCGCAGCACCGAGGAACTGCAGTGGGACCTCGACTACCTGCTGCAACTGTGGAGCGCGATCAAGGAAGCGTCCGGCGAACGTGGCGCGCCCTTCCTGATCTACCAGGAAAGCAACGTCATCATCCGCGCCATCCGCGACTACCTGCGCCAGGACATCGGCGAAGTGCTGATCGACAGCATCGACGCCCAGGAAGAAGCCCTGAACTTCATCCGCCAGGTGATGCCGCAGTACGCCAGCAAGGTGAAGCTGTACCAGGACAGCGTTCCGCTGTTCAATCGCTTCCAGATCGAGAGCCAGATCGAGACCGCTTTCCAGCGCGAAGTGAAGCTGCCGTCCGGCGGCTCCATCGTCATCGACCCGACCGAGGCCCTGGTTTCCATCGACATCAACTCGGCGCGCGCCACCAAGGGCGGCGACATCGAGGAAACCGCCCTGCAGACCAACCTGGAAGCGGCCGAGGAAATCGCCCGCCAGCTGCGCCTGCGTGACATCGGCGGCCTGATCGTCATCGACTTCATCGACATGACCCCGGCGAAGAACCAGCGCGCCGTGGAAGAGCGTGTCCGCGAAGCCCTCGAGGCCGACCGCGCGCGCGTCCAGGTCGGTCGCATCTCGCGCTTCGGCCTGCTGGAAATGTCCCGCCAGCGCCTGCGTCCGTCCCTCGGCGAGACCAGCGGCATCGTCTGCCCGCGCTGCAACGGCCAGGGCATCATCCGCGACGTCGAGTCGCTGTCGCTGGCCATCCTGCGCCTGATCGAGGAAGAAGCCCTGAAGGACCGCACCGCGGAAGTCCGCGCCCGCGTGCCCTTCCAGGTCGCCGCCTTCCTGCTCAACGAGAAGCGCAACGCCATCACCAAGATCGAACTGCGTACCCGCGCGCGCATCTTCATCCTGCCGGACGATCATCTGGAAACCCCGCATTTCGAAGTCCAGCGTCTGCGCGATGACAGCCCCGAACTGGTTGCCGGCCAGACCAGCTACGAAATGGCCACCGTCGAGCACGAAGAAGCCCAGCCGGTCAGCTCGACCCGCACCCTGGTCCGCCAGGAAGCAGCAGTCAAGACCGTCGCTCCCCAGCAGCCCGCACCGCAACACACCGAAGCACCGGTCGAGCCGGCCAAGCCGATGCCCGAGCCGAGCCTGTTCCAGGGCCTGGTGAAGTCCCTGGTCGGCCTGTTCGCAGGCAAGGATCAACCTGCCGCCAAGCCTGCTGAAACCAGCAAGCCGGCTGCCGAGCGCCAAACCCGCCAGGACGAGCGTCGCAACGGCCGCCAGCAGAACCGCCGCCGCGATGGCCGCGATGGCAATCGCCGCGACGAAGAGCGCAAACCGCGCGAGGAGCGTGCAGAGCGTCAACCGCGCGAAGAGCGCGCCGAACGCCCGAACCGCGAAGAGCGCAGCGAACGTCGCCGCGAAGAGCGCGCCGAGCGCCCGGCTCGCGAGGAGCGCCAGCCGCGCGAAGGCCGTGAAGAGCGCGCCGAGCGGACACCCCGCGAAGAGCGCCAGCCGCGCGAAGGCCGCGAAGGTCGCGAGGAACGCAGCGAACGCCGCCGCGAAGAGCGCGCCGAACGCCCGGCCCGCGAAGAGCGCCAACCCCGCGAAGGCCGTGAAGAACGCGCCGAGCGCCCGGCCCGCGAAGAGCGCCAGCCGCGCGAGGATCGCCAGGCTCGCGACGCCGCGGCCCTGGAAGCCGAGGCATTGCCGAACGACGAGAGCCTGGAGCAGGACGAGCAGGACGATACCGATGGCGAGCGCCCGCGCCGCCGCTCCCGCGGCCAGCGTCGTCGCAGCAACCGCCGCGAACGCCAGCGCGAGGTCAGCGGCGAGCTGGAAGGCAGCGAGGCGACCGATAACGCCGCCGCGCCGCTGAACACCGTCGCAGCCGCCGCCGCTGCCGGTATCGCTGTCGCCAGCGAAGCCGTAGAAGCAAACGTGGAGCAAGCCCCGGCCACTACCAGCGAGGCTGCCAGCGAAACCACGGCAAGCGATGAGACCGACGCGTCGACCAGCGAAGCCGTCGAAACCCAGGGCGCGGACAGCGAGGCCAATACCGGCGAAACCGCCGACATCGAAGCGCCGGTGACCGTCAGCGTGGTCCGGGACGAAGCCGACCAGAGCACCCTGCTGGTCGCGCAAGCCACTGAAGAAGCTCCCTTCGCCAGCGAAAGCGTGGAAAGCCGCGAAGACGCCGAGAGCGCCGTGCAACCGGCAACGGAAGCGGCCGAAGAAGTTGCCGCTCCGGTGCCCGTCGAAGTAGCAGCCCCTAGCGAGCCCGCAGCCACCGAGGAGCCGACCCCGGCCATCGCGGCGGTGCCGGCCAACGCGACTGGCCGTGCCCTCAACGACCCACGGGAAAAACGTCGCCTGCAACGCGAAGCCGAGCGTCTGGCACGCGAAGCCGCAGCAGCAGCCGAAGCGGCAGCTCAGGCCGCTCCCGCCGTCGAGGAGATCCCGGCTGTAGCGAGCGAGGAAGCGTCGGCCCAGGAGGAACCTGCTGCACCCCAGGCTGAAGAAATCACCCAGGCCGACGTTCCGTCCCAGGCGGACGAAGCCCAGGAAGCGGTACAGGCCGAGCCTGAAGCTTCCGGCGAAGGCGCCGCCGACACGGAGCACGCGAAAAAGACCGAGGAAAGCGAAACCTCGCGCCCGCATGCCTGA
Protein Properties
Protein Residues: 1057
Protein Molecular Weight: 117.5 kDa
Protein Theoretical pI: 4.6
Hydropathicity (GRAVY score): -0.857
Charge at pH 7 (predicted): -52.17
Protein Sequence: 
>PA2976
MKRMLINATQPEELRVALVDGQRLFDLDIESGAREQKKANIYKGRITRVEPSLEAAFVDFGAERHGFLPLKEISREYFKKSPEGRINIKEVLSEGQEVIVQVEKEERGNKGAALTTFISLAGRYLVLMPNNPRAGGISRRIEGEERNELREALNGLNAPADMGLIVRTAGLGRSTEELQWDLDYLLQLWSAIKEASGERGAPFLIYQESNVIIRAIRDYLRQDIGEVLIDSIDAQEEALNFIRQVMPQYASKVKLYQDSVPLFNRFQIESQIETAFQREVKLPSGGSIVIDPTEALVSIDINSARATKGGDIEETALQTNLEAAEEIARQLRLRDIGGLIVIDFIDMTPAKNQRAVEERVREALEADRARVQVGRISRFGLLEMSRQRLRPSLGETSGIVCPRCNGQGIIRDVESLSLAILRLIEEEALKDRTAEVRARVPFQVAAFLLNEKRNAITKIELRTRARIFILPDDHLETPHFEVQRLRDDSPELVAGQTSYEMATVEHEEAQPVSSTRTLVRQEAAVKTVAPQQPAPQHTEAPVEPAKPMPEPSLFQGLVKSLVGLFAGKDQPAAKPAETSKPAAERQTRQDERRNGRQQNRRRDGRDGNRRDEERKPREERAERQPREERAERPNREERSERRREERAERPAREERQPREGREERAERTPREERQPREGREGREERSERRREERAERPAREERQPREGREERAERPAREERQPREDRQARDAAALEAEALPNDESLEQDEQDDTDGERPRRRSRGQRRRSNRRERQREVSGELEGSEATDNAAAPLNTVAAAAAAGIAVASEAVEANVEQAPATTSEAASETTASDETDASTSEAVETQGADSEANTGETADIEAPVTVSVVRDEADQSTLLVAQATEEAPFASESVESREDAESAVQPATEAAEEVAAPVPVEVAAPSEPAATEEPTPAIAAVPANATGRALNDPREKRRLQREAERLAREAAAAAEAAAQAAPAVEEIPAVASEEASAQEEPAAPQAEEITQADVPSQADEAQEAVQAEPEASGEGAADTEHAKKTEESETSRPHA
References
External Links:
Resource Link
Genome ID: PA2976
Entrez Gene ID: 880516
NCBI Protein ID: 15598172
General Reference: PaperBLAST - Find papers about PA2976 and its homologs