| Identification |
| Name: |
ribonuclease D |
| Synonyms: |
Not Available |
| Gene Name: |
rnd |
| Enzyme Class: |
Not Available |
| Biological Properties |
| General Function: |
RNA metabolic process, nucleobase-containing compound metabolic process, cellular metabolic process, tRNA processing |
| Specific Function: |
GTP diphosphokinase activity, nucleic acid binding, 3'-5' exonuclease activity, nucleotide binding, catalytic activity, ribonuclease D activity |
| Cellular Location: |
Cytoplasmic |
| KEGG Pathways: |
|
| KEGG Reactions: |
Not Available |
| SMPDB Reactions: |
Not Available |
| PseudoCyc/BioCyc Reactions: |
| a tRNA precursor with a 5' extension and a short 3' extension → a tRNA precursor with a 5' extension + a ribonucleoside 5'-monophosphate ReactionCard | | a tRNA precursor with a short 3' extension → an uncharged tRNA + n a nucleoside 5'-monophosphate ReactionCard | |
 | → | Nucleoside-Monophosphates |
| | |
| → | Ribonucleoside-Monophosphates |
| |
|
| Complex Reactions: |
Not Available |
| Transports: |
Not Available |
| Metabolites: |
Not Available |
| GO Classification: |
| Component |
|---|
| intracellular | | Function |
|---|
| GTP diphosphokinase activity | | nucleic acid binding | | 3'-5' exonuclease activity | | nucleotide binding | | catalytic activity | | ribonuclease D activity | | Process |
|---|
| RNA metabolic process | | nucleobase-containing compound metabolic process | | cellular metabolic process | | tRNA processing |
|
| Gene Properties |
| Locus tag: |
PA1294 |
| Strand: |
+ |
| Entrez Gene ID: |
881579 |
| Accession: |
NP_249985.1 |
| GI: |
15596491 |
| Sequence start: |
1405338 |
| Sequence End: |
1406462 |
| Sequence Length: |
1124 |
| Gene Sequence: |
>PA1294
GTGACCGCGCCCGAAATCCAGTGGATCCGCGATGATGCCAGCCTGGCGCAGCAATGCCGGGAATGGCGCACACAGCCGTACCTCGCGCTCGATACCGAGTTCATGCGCGTCGATACCTTCTATCCCGCGGCCGGTCTGGTGCAGGTGGGCGATGGCCGGCAGGAGTGGCTGATCGATCCGCTGCTGATCCAGGACTGGAGCCCCTTCGCCGAGCTGCTCGAAGACGAGCGGGTGGTGAAGGTGCTGCATGCCTGCAGCGAAGACCTCGAGGTGTTCCTGCGCCTCACCGGCAGCCTGCCGGTGCCGCTGTTCGATACGCAGTTGGCCGCCGCTTATCTCGGCATGGCCCATTCGATGGGCTACTCGAAGCTGGTGAAGGAGGTGCTGGACATCGACCTGCCCAAGGACGAGACCCGTTCCGACTGGTTGCAACGGCCGCTCACCGAGATGCAGATGCGCTACGCCGCCGACGACGTCCAGCACCTCGCCCAGGTCTACCTGGCCCTGGATACGCGGCTGAGCGAGGAGAAACGCGCCTGGCTGCTGGAGGACGGCGCCGAACTGGTCGCCAACCTCTGCCGCGAGAGCGATCCGCGCGAGGCCTACCGCGAGGTCAAGCTGGGTTGGCGGCTGCGTCCGCAGCAACTGGCGGTGCTCCGCGAACTCTGCGCCTGGCGCGAGGAGCAGGCACGCCTGCGCAACCGGCCGCGCAACCACGTGCTGCGCGAACGCACCCTGTGGCCGCTGGCGCGCCTGCTGCCGAAGAACAAGACCGACCTGGCGGCGATCGAGGACATGCATCCGCGCACCGTGCGCCAGGACGGCGACTTCCTCATCGAACTGATCGCCCAGGCTGCGCGCCTGCCGCAGAGCGAATGGCCCGAGGCGCTGCCCGAGCCGCTGCCGCCGGAGGTCACCCCGCTGCTCAAGAGCCTGCGCGCCATCGGCCAGCGCGAAGCGGAGACCCTGGGCATGGCGCCCGAACTGATGCTGCGCAAGAAAGTCCTCGAGGCACTGCTCAAGAGCGGCTATCCCGACGGTCCCTACGAACTGCCCGATTCCCTCCGTGGCTGGCGCCGCGAACGCATGGGCCAGGCCCTGCTGGACGCCCTGGAGAGCGCATGA |
| Protein Properties |
| Protein Residues: |
374 |
| Protein Molecular Weight: |
43.1 kDa |
| Protein Theoretical pI: |
4.79 |
| Hydropathicity (GRAVY score): |
-0.399 |
| Charge at pH 7 (predicted): |
-12.89 |
| Protein Sequence: |
>PA1294
MTAPEIQWIRDDASLAQQCREWRTQPYLALDTEFMRVDTFYPAAGLVQVGDGRQEWLIDPLLIQDWSPFAELLEDERVVKVLHACSEDLEVFLRLTGSLPVPLFDTQLAAAYLGMAHSMGYSKLVKEVLDIDLPKDETRSDWLQRPLTEMQMRYAADDVQHLAQVYLALDTRLSEEKRAWLLEDGAELVANLCRESDPREAYREVKLGWRLRPQQLAVLRELCAWREEQARLRNRPRNHVLRERTLWPLARLLPKNKTDLAAIEDMHPRTVRQDGDFLIELIAQAARLPQSEWPEALPEPLPPEVTPLLKSLRAIGQREAETLGMAPELMLRKKVLEALLKSGYPDGPYELPDSLRGWRRERMGQALLDALESA |
| References |
| External Links: |
|
| General Reference: |
PaperBLAST - Find papers about PA1294 and its homologs
|
