sigma factor RpoD (PA0576)
| Identification | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Name: | sigma factor RpoD | ||||||||
| Synonyms: | rpoDA | ||||||||
| Gene Name: | rpoD | ||||||||
| Enzyme Class: | Not Available | ||||||||
| Biological Properties | |||||||||
| General Function: | regulation of transcription, DNA-templated, DNA-templated transcription, initiation | ||||||||
| Specific Function: | DNA binding, sequence-specific DNA binding transcription factor activity, sigma factor activity | ||||||||
| Cellular Location: | Outer Membrane Vesicle | ||||||||
| KEGG Pathways: |
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| KEGG Reactions: | Not Available | ||||||||
| SMPDB Reactions: | Not Available | ||||||||
| PseudoCyc/BioCyc Reactions: |
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| Complex Reactions: | Not Available | ||||||||
| Transports: | Not Available | ||||||||
| Metabolites: | Not Available | ||||||||
| GO Classification: |
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| Gene Properties | |||||||||
| Locus tag: | PA0576 | ||||||||
| Strand: | - | ||||||||
| Entrez Gene ID: | 882038 | ||||||||
| Accession: | NP_249267.1 | ||||||||
| GI: | 15595773 | ||||||||
| Sequence start: | 634371 | ||||||||
| Sequence End: | 636224 | ||||||||
| Sequence Length: | 1853 | ||||||||
| Gene Sequence: |
>PA0576 ATGTCCGGAAAAGCGCAACAGCAATCTCGTCTGAAAGAGTTGATCGCCCGAGGCCGTGAGCAGGGATACCTGACTTACGCGGAGGTCAACGACCACCTGCCGGAGGATATTTCCGATCCGGAACAGGTGGAAGACATCATCCGCATGATCAACGACATGGGGATCAACGTATTCGAGACAGCCCCGGATGCGGATGCCCTGTTGCTGGCCGAGGCGGATACCGACGAAGCCGCAGCGGAAGAAGCCGCAGCGGCCCTGGCCGCGGTGGAAAGCGACATCGGTCGCACCACCGACCCGGTGCGCATGTACATGCGTGAAATGGGTACCGTGGAACTGCTGACCCGCGAAGGCGAGATCGAAATCGCCAAGCGCATCGAGGAAGGCATCCGCGAAGTGATGAGCGCCATCGCCCAGTTCCCGGGCACGGTGGACAGCATCCTGGCCGACTACAATCGCATCGTCGCCGAAGGCGGTCGCCTCTCCGACGTCCTCAGCGGCTATATCGATCCCGATGACGGCAGCCTGCCCGCCGAAGAGGTGGAGCCGGTCAACCTGAAGGACGATTCCGCCGACTCGAAAGAGAAGGACGACGAGGAAGAAGAAAGCGACGACAGCAGCGACAGCGACGACGAAGGCGACGGCGGTCCGGATCCGGAAGAAGCCCGCCTGCGTTTCACCGCGGTCTCCGAGCAGCTCGACAAGGCCAAGAAGGCCCTGAAGAAGCACGGTCGCGGCAGCAAGCAGGCCACCGCCGAACTCACCGGCCTGGCCGAGCTGTTCATGCCGATCAAGCTGGTGCCCAAGCAGTTCGACGCCCTGGTCGCCCGCGTGCGCTCCGCCCTGGAAGGCGTGCGCGCCCAGGAACGCGCCATCATGCAGCTCTGCGTGCGTGACGCGCGCATGCCGCGTGCCGACTTCCTGCGCCTGTTCCCGAACCACGAGACCGACGAGAAGTGGGTCGACAGCGTCCTGAAGAGCAAGCCGAAGTACGCCGAGGCCATCGAGCGCCTGCGCGACGACATCCTGCGCAACCAGCAGAAGCTGGCGGCCCTGGAAAGCGAGGTCGAGCTGACCGTCGCCGAGATCAAGGAAATCAACCGCGCGATGTCGATCGGCGAAGCCAAGGCTCGCCGGGCGAAGAAGGAAATGGTCGAGGCCAACCTGCGCCTGGTGATTTCCATCGCCAAGAAGTACACCAACCGCGGCCTGCAATTCCTCGACCTGATCCAGGAAGGCAACATCGGCCTGATGAAGGCGGTGGACAAGTTCGAATACCGTCGCGGCTACAAGTTCTCCACCTACGCCACCTGGTGGATTCGCCAGGCGATCACCCGTTCGATCGCCGACCAGGCACGCACCATCCGCATCCCGGTGCACATGATCGAGACGATCAACAAGCTCAACCGCATCTCCCGCCAGATGCTCCAGGAAATGGGTCGCGAGCCCACCCCGGAAGAGCTTGGCGAGCGCATGGACATGCCTGAGGACAAGATCCGCAAGGTACTGAAGATCGCCAAAGAGCCGATCTCCATGGAAACCCCGATCGGTGACGACGAAGATTCGCACCTGGGCGATTTCATCGAGGACTCCACCATGCAGTCGCCGATCGAGATGGCGACCAGCGAGAGCCTCAAGGAATCCACCCGCGAAGTCCTCGCCGGCCTCACTGCCCGGGAAGCCAAGGTGCTGCGCATGCGCTTCGGCATCGACATGAACACCGACCACACCCTCGAGGAAGTCGGCAAGCAGTTCGATGTGACCCGCGAGCGGATCCGCCAGATCGAAGCCAAGGCGCTGCGCAAGCTGCGCCATCCGTCGCGAAGCGAGCACCTTCGCTCCTTCCTCGACGAGTGA | ||||||||
| Protein Properties | |||||||||
| Protein Residues: | 617 | ||||||||
| Protein Molecular Weight: | 69.6 kDa | ||||||||
| Protein Theoretical pI: | 4.62 | ||||||||
| Hydropathicity (GRAVY score): | -0.593 | ||||||||
| Charge at pH 7 (predicted): | -31.01 | ||||||||
| Protein Sequence: |
>PA0576 MSGKAQQQSRLKELIARGREQGYLTYAEVNDHLPEDISDPEQVEDIIRMINDMGINVFETAPDADALLLAEADTDEAAAEEAAAALAAVESDIGRTTDPVRMYMREMGTVELLTREGEIEIAKRIEEGIREVMSAIAQFPGTVDSILADYNRIVAEGGRLSDVLSGYIDPDDGSLPAEEVEPVNLKDDSADSKEKDDEEEESDDSSDSDDEGDGGPDPEEARLRFTAVSEQLDKAKKALKKHGRGSKQATAELTGLAELFMPIKLVPKQFDALVARVRSALEGVRAQERAIMQLCVRDARMPRADFLRLFPNHETDEKWVDSVLKSKPKYAEAIERLRDDILRNQQKLAALESEVELTVAEIKEINRAMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREPTPEELGERMDMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDSTMQSPIEMATSESLKESTREVLAGLTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEHLRSFLDE | ||||||||
| References | |||||||||
| External Links: |
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| General Reference: | PaperBLAST - Find papers about PA0576 and its homologs | ||||||||