Record Information
Version 1.0
Update Date 1/22/2018 12:54:54 PM
Metabolite IDPAMDB120477
Identification
Name: D-arabitol
Description:The D-enantiomer of arabinitol.
Structure
Thumb
Synonyms:
  • D-Arabinitol
  • D-arabinitol
  • D-Arabinol
  • D-Arabitol
  • D-Lyxitol
Chemical Formula: C5H12O5
Average Molecular Weight: 152.147
Monoisotopic Molecular Weight: 152.06847
InChI Key: HEBKCHPVOIAQTA-QWWZWVQMSA-N
InChI:InChI=1S/C5H12O5/c6-1-3(8)5(10)4(9)2-7/h3-10H,1-2H2/t3-,4-/m1/s1
CAS number: 488-82-4
IUPAC Name:D-arabinitol
Traditional IUPAC Name: 1,2,3,4,5-pentahydroxypentane
SMILES:C(O)C(O)C(O)C(O)CO
Chemical Taxonomy
Taxonomy DescriptionThis compound belongs to the class of chemical entities known as sugar alcohols. These are hydrogenated forms of carbohydrate in which the carbonyl group (aldehyde or ketone, reducing sugar) has been reduced to a primary or secondary hydroxyl group.
Kingdom Chemical entities
Super ClassOrganic compounds
Class Organic oxygen compounds
Sub ClassOrganooxygen compounds
Direct Parent Sugar alcohols
Alternative Parents
Substituents
  • Sugar alcohol
  • Monosaccharide
  • Secondary alcohol
  • Polyol
  • Hydrocarbon derivative
  • Primary alcohol
  • Alcohol
  • Aliphatic acyclic compound
Molecular Framework Aliphatic acyclic compounds
External Descriptors
Physical Properties
State: Solid
Charge:0
Melting point: 101 - 104 °C
Experimental Properties:
PropertyValueReference
Melting Point101 - 104 °CNot Available
Boiling PointNot AvailableNot Available
Water Solubility729 mg/mLNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
Water Solubility664.0 mg/mLALOGPS
logP-2.5ALOGPS
logP-3.1ChemAxon
logS0.64ALOGPS
pKa (Strongest Acidic)12.76ChemAxon
pKa (Strongest Basic)-3ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count5ChemAxon
Hydrogen Donor Count5ChemAxon
Polar Surface Area101.15 Å2ChemAxon
Rotatable Bond Count4ChemAxon
Refractivity32.44 m3·mol-1ChemAxon
Polarizability14.42 Å3ChemAxon
Number of Rings0ChemAxon
Bioavailability1ChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleYesChemAxon
Biological Properties
Cellular Locations: Not Available
Reactions:
Pathways: Not Available
Spectra
Spectra:
Spectrum TypeDescriptionSplash Key
LC-MS/MSLC-MS/MS Spectrum - Quattro_QQQ 10V, Positive (Annotated)splash10-01ba-9500000000-67233150807800e941f0View in MoNA
LC-MS/MSLC-MS/MS Spectrum - Quattro_QQQ 25V, Positive (Annotated)splash10-01b9-9000000000-1ff17a8b87bbab9a3622View in MoNA
LC-MS/MSLC-MS/MS Spectrum - Quattro_QQQ 40V, Positive (Annotated)splash10-044i-9000000000-e0e330c8a899be718f60View in MoNA
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 10V, Positivesplash10-0udi-1900000000-88c39e799daf7fb9dbcaView in MoNA
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 20V, Positivesplash10-03di-9300000000-66487a26d7047f9096a9View in MoNA
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 40V, Positivesplash10-03dl-9000000000-514c2ae8b98eb4994147View in MoNA
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 10V, Negativesplash10-0udu-9400000000-b3ca0d23907878fbe1a8View in MoNA
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 20V, Negativesplash10-0btl-9200000000-92a36674373a271da867View in MoNA
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 40V, Negativesplash10-0btc-9000000000-5e7378c18473f8226282View in MoNA
MSMass Spectrum (Electron Ionization)splash10-01vo-9000000000-f065454e8412613f8ecdView in MoNA
1D NMR1H NMR SpectrumNot Available
1D NMR13C NMR SpectrumNot Available
1D NMR1H NMR SpectrumNot Available
2D NMR[1H,13C] 2D NMR SpectrumNot Available
References
References:
  • Sánchez-Fresneda R, Guirao-Abad JP, Argüelles A, González-Párraga P, Valentín E, Argüelles JC (2013)Specific stress-induced storage of trehalose, glycerol and D-arabitol in response to oxidative and osmotic stress in Candida albicans. Biochemical and biophysical research communications 430, Pubmed: 23261427
  • Roboz J (1994)Diagnosis and monitoring of disseminated candidiasis based on serum/urine D/L-arabinitol ratios. Chirality 6, Pubmed: 8204415
  • Sigmundsdóttir G, Christensson B, Björklund LJ, Håkansson K, Pehrson C, Larsson L (2000)Urine D-arabinitol/L-arabinitol ratio in diagnosis of invasive candidiasis in newborn infants. Journal of clinical microbiology 38, Pubmed: 10921974
Synthesis Reference: Delobeau, Didier; Moine, Didier. Process for the preparation of d-arabitol from lactose. Eur. Pat. Appl. (1997), 9 pp.
Material Safety Data Sheet (MSDS) Not Available
External Links:
ResourceLink
HMDBHMDB00568
CHEMSPIDER84971
CHEBI18333
PUBCHEM94154
LIGAND-CPDC01904
CAS488-82-4