Record Information |
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Version |
1.0 |
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Update Date |
1/22/2018 12:54:54 PM |
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Metabolite ID | PAMDB120142 |
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Identification |
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Name: |
linear dimeric GMP |
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Description: | Trianion of 5'-phosphoguanylyl(3'→5')guanosine. |
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Structure |
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Synonyms: | - l-di-GMP
- 5'pGpG
- 5'-phosphoguanylyl(3'>5')guanosine
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Chemical Formula: |
C20H23N10O15P2 |
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Average Molecular Weight: |
705.407 |
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Monoisotopic Molecular
Weight: |
708.1054 |
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InChI Key: |
ZEHOHLFQOXAZHX-MHARETSRSA-K |
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InChI: | InChI=1S/C20H26N10O15P2/c21-19-25-13-7(15(34)27-19)23-3-29(13)17-10(32)9(31)5(43-17)1-42-47(39,40)45-12-6(2-41-46(36,37)38)44-18(11(12)33)30-4-24-8-14(30)26-20(22)28-16(8)35/h3-6,9-12,17-18,31-33H,1-2H2,(H,39,40)(H2,36,37,38)(H3,21,25,27,34)(H3,22,26,28,35)/p-3/t5-,6-,9-,10-,11-,12-,17-,18-/m1/s1 |
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CAS
number: |
Not Available |
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IUPAC Name: | Not Available |
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Traditional IUPAC Name: |
Not Available |
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SMILES: | C(OP([O-])(OC1(C(COP([O-])([O-])=O)OC(C(O)1)N3(C=NC2(C(=O)NC(N)=NC=23))))=O)C4(OC(C(O)C(O)4)N6(C=NC5(C(=O)NC(N)=NC=56))) |
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Chemical Taxonomy |
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Taxonomy Description | This compound belongs to the class of organic compounds known as (3'-\u003e5')-dinucleotides. These are dinucleotides where the two bases are connected via a (3'-\u003e5')-phosphodiester linkage. |
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Kingdom |
Organic compounds |
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Super Class | Nucleosides, nucleotides, and analogues |
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Class |
(3'-\u003e5')-dinucleotides and analogues |
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Sub Class | (3'-\u003e5')-dinucleotides |
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Direct Parent |
(3'-\u003e5')-dinucleotides |
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Alternative Parents |
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Substituents |
- (3'-\u003e5')-dinucleotide
- Purine ribonucleoside 3',5'-bisphosphate
- Purine ribonucleoside bisphosphate
- Purine ribonucleoside monophosphate
- Ribonucleoside 3'-phosphate
- Pentose phosphate
- Pentose-5-phosphate
- Glycosyl compound
- N-glycosyl compound
- 6-oxopurine
- Monosaccharide phosphate
- Hypoxanthine
- Imidazopyrimidine
- Purine
- Aminopyrimidine
- Dialkyl phosphate
- Pyrimidone
- Pyrimidine
- Monosaccharide
- Phosphoric acid ester
- Organic phosphoric acid derivative
- N-substituted imidazole
- Alkyl phosphate
- Vinylogous amide
- Imidazole
- Heteroaromatic compound
- Oxolane
- Azole
- Lactam
- Secondary alcohol
- Organoheterocyclic compound
- Azacycle
- Oxacycle
- Organic nitrogen compound
- Alcohol
- Organonitrogen compound
- Organooxygen compound
- Primary amine
- Hydrocarbon derivative
- Organic oxide
- Organopnictogen compound
- Organic oxygen compound
- Amine
- Organic anion
- Aromatic heteropolycyclic compound
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Molecular Framework |
Aromatic heteropolycyclic compounds |
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External Descriptors |
- a small molecule (L-DI-GMP)
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Physical Properties |
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State: |
Not Available |
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Charge: | -3 |
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Melting point: |
Not Available |
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Experimental Properties: |
Not Available |
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Predicted Properties |
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Biological Properties |
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Cellular Locations: |
Not Available |
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Reactions: | |
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Pathways: |
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Spectra |
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Spectra: |
Not Available |
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References |
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References: |
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Synthesis Reference: |
Not Available |
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Material Safety Data Sheet (MSDS) |
Not Available |
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Links |
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External Links: |
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