5-deoxy-α-ribose 1-phosphate (PAMDB120126)

IdentificationTaxonomyPhysical PropertiesBiological PropertiesSpectraConcentrationsLinksReferencesEnzymes Transporters
Proteins (3280)
Record Information
Version 1.0
Update Date 1/22/2018 12:54:54 PM
Metabolite IDPAMDB120126
Identification
Name: 5-deoxy-α-ribose 1-phosphate
Description:An organophosphate oxoanion resulting from the removal of two protons from the phosphate group of 5-deoxy-α-D-ribose 1-phosphate.
Structure
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🔍MOLSDFPDBSMILESInChIView Structure
Synonyms:
  • 5-deoxy-1-O-phosphonato-α-D-ribofuranose
  • 5-deoxy-α-D-ribose 1-phosphate
Chemical Formula: C5H9O7P
Average Molecular Weight: 212.096
Monoisotopic Molecular Weight: 214.02425
InChI Key: XXQFKXPJJNBLSU-TXICZTDVSA-L
InChI:InChI=1S/C5H11O7P/c1-2-3(6)4(7)5(11-2)12-13(8,9)10/h2-7H,1H3,(H2,8,9,10)/p-2/t2-,3-,4-,5-/m1/s1
CAS number: Not Available
IUPAC Name:5-deoxy-α-D-ribofuranose 1-phosphate
Traditional IUPAC Name: Not Available
SMILES:CC1(OC(C(C1O)O)OP([O-])([O-])=O)
Chemical Taxonomy
Taxonomy DescriptionThis compound belongs to the class of organic compounds known as pentoses. These are monosaccharides in which the carbohydrate moiety contains five carbon atoms.
Kingdom Organic compounds
Super ClassOrganic oxygen compounds
Class Organooxygen compounds
Sub ClassCarbohydrates and carbohydrate conjugates
Direct Parent Pentoses
Alternative Parents
Substituents
  • Pentose monosaccharide
  • Alkyl phosphate
  • Phosphoric acid ester
  • Organic phosphoric acid derivative
  • Tetrahydrofuran
  • Secondary alcohol
  • 1,2-diol
  • Oxacycle
  • Organoheterocyclic compound
  • Organic oxide
  • Hydrocarbon derivative
  • Alcohol
  • Organic anion
  • Aliphatic heteromonocyclic compound
Molecular Framework Aliphatic heteromonocyclic compounds
External Descriptors Not Available
Physical Properties
State: Not Available
Charge:-2
Melting point: Not Available
Experimental Properties: Not Available
Predicted Properties
PropertyValueSource
Mass212.0943ChemAxon
logP-0.5613ChemAxon
H-bond acceptors7ChemAxon
H-bond donors2ChemAxon
Rotatable bonds2ChemAxon
PSA131.9200ChemAxon
RO5 violations0ChemAxon
RO3 violations2ChemAxon
Refractivity36.4511ChemAxon
Atoms22ChemAxon
Rings1ChemAxon
Heavy atoms13ChemAxon
Hydrogen atoms9ChemAxon
Heteroatoms8ChemAxon
N/O atoms7ChemAxon
Inorganic atoms0ChemAxon
Halogen atoms0ChemAxon
Chiral centers4ChemAxon
R/S chiral centers0ChemAxon
Unknown chiral centers0ChemAxon
Undefined chiral centers4ChemAxon
Stereo double bonds0ChemAxon
Cis/trans stereo double bonds0ChemAxon
Unknown stereo double bonds0ChemAxon
Undefined stereo double bonds 0ChemAxon
Biological Properties
Cellular Locations: Not Available
Reactions:
5'-Deoxyadenosine + phosphate → 5-deoxy-α-ribose 1-phosphate + Adenine
Pathways:
    Spectra
    Spectra: Not Available
    References
    References:
    Synthesis Reference: Not Available
    Material Safety Data Sheet (MSDS) Not Available
    External Links:
    ResourceLink
    CHEBI58749